create_features_df() and added an example gene-level SCNA data frame example_gene_scna_tableorg.Hs.eg.db, TxDb.Hsapiens.UCSC.hg19.knownGene and TxDb.Hsapiens.UCSC.hg38.knownGene from "Imports" to "Suggests" per new CRAN policy. Relevant functions raise error if the required package is not installed.MCR_table. The coordinates were converted to hg19 (from hg18)caret::predict.train explicitcreate_SCNA_score_df() where the SCNA score was not calculated because the column name for "MCR_overlap_percent" was incorrectly assigned as "transcript_overlap_percent"TCGA_MTL_fit and specific_thresholds after fixing the issue abovena.string argument to create_noncoding_impact_score_df(), predict_coding_impact() and create_features_df() as the string that was used to indicate when a score is not available during annotation with ANNOVAR (default = ".")determine_hotspot_genes() to able to use occurrence annotations from different versions of COSMICInitial release